RetrogeneDB ID: | retro_etel_349 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5773:270002..270390(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 65.22 % |
Parental protein coverage: | 98.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MGKFMKPGKVVLVLAGRY-SGRKAVIVKNI-DDGTSDRPYSHALVAGIDR-YPRKVTAAMGKKKIAKRSK |
M..FM.P.KVVLVLAG...SG.K...VKN..DDGTSD.PYSH.L.AGI...YP..VT.AMGKKKI.KRSK | |
Retrocopy | MATFMTPRKVVLVLAGLN<SGCKVITVKNM<DDGTSDHPYSHTLMAGITV<YPCTVTDAMGKKKITKRSK |
Parental | IKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTG-KNKWFFQKL |
IK..VKVYNYNHL.P.RYSV.I...KT..NKDVF.DP.LK.KA..EAKV......KTG.KNK..FQ.L | |
Retrocopy | IKPLVKVYNYNHLIPMRYSVEISSGKTLINKDVFKDPELKQKAWQEAKVRY----KTG>KNKSCFQNL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |