RetrogeneDB ID: | retro_etel_350 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5807:61546..61793(+) | ||
Located in intron of: | ENSETEG00000013725 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1G1 | ||
Ensembl ID: | ENSETEG00000008080 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864] |
Percent Identity: | 59.09 % |
Parental protein coverage: | 72.88 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | EKRAAEKVSEARKRKNRRLKQAKEEAQAEIEQYRLQ-REK-EFKAKEAAALGSHGSVSTEVEKETEEKMT |
EKR..E.V...RKR.......A...AQAE.EQY....REK.EFK..EAAALGS.GS.STEV......K.. | |
Retrocopy | EKRV*EGVKACRKRTVA--EAARAAAQAETEQYACK<REK<EFKVREAAALGSQGSCSTEVLNKAG-KR* |
Parental | LLQTYFRQNRDDVLDSLL |
LLQTYFRQNRD.VLD.LL | |
Retrocopy | LLQTYFRQNRDGVLDTLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |