RetrogeneDB ID: | retro_etel_374 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6420:180071..180354(+) | ||
Located in intron of: | ENSETEG00000009277 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC8 | ||
Ensembl ID: | ENSETEG00000008348 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:HGNC Symbol;Acc:15470] |
Percent Identity: | 81.44 % |
Parental protein coverage: | 62.09 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | VLQIDPEVTDEDIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRAL-DVIQAGKEY |
VLQ.DP.VTDE..KKRFRQLSI.VHPDK.QDDADRAQKAFEAV.KAYKLLLDQEQKKRAL.DVIQAGKEY | |
Retrocopy | VLQLDPKVTDEAVKKRFRQLSI*VHPDKTQDDADRAQKAFEAVGKAYKLLLDQEQKKRAL<DVIQAGKEY |
Parental | VXXXV-KERKKQLKKEGKPTNVEEDDP |
V.........KQ.KKEGKPTNVEEDDP | |
Retrocopy | VDNTL<VKERKQPKKEGKPTNVEEDDP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |