RetrogeneDB ID: | retro_etel_376 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6523:105126..105344(+) | ||
Located in intron of: | ENSETEG00000001008 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 86.49 % |
Parental protein coverage: | 57.03 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD-QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL |
VKT.TGKTITLEVEPSDT.E..KAKIQDKEGIPPD.QQRLIF.GKQLEDG.TLSDYNIQK.STLHLVL.L | |
Retrocopy | VKTVTGKTITLEVEPSDTTEKAKAKIQDKEGIPPD<QQRLIFTGKQLEDGCTLSDYNIQK*STLHLVLHL |
Parental | RGGI |
RGG. | |
Retrocopy | RGGV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |