RetrogeneDB ID: | retro_etel_382 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6593:196951..197231(-) | ||
Located in intron of: | ENSETEG00000018669 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSETEG00000000203 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 55.21 % |
Parental protein coverage: | 50.81 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | KRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATD-SSGEL-MFLMKWKNSDEADLVPAKE |
KRK..SDSE..G..SK.K......EK.RGFAR...PE...GATD...G...M.L.K...S..ADLV.AKE | |
Retrocopy | KRKSLSDSELDG--SKSKERRDAAEKARGFARAHDPE*VTGATDRQQGSI>MCLKK*EDSHKADLVLAKE |
Parental | ANVKCPQVVISFYEERLTWHSYPSED |
AN.K.PQ.V..FYEER.TWHSYP... | |
Retrocopy | ANMKGPQFVVVFYEERRTWHSYPDDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |