RetrogeneDB ID: | retro_etel_384 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6645:9973..10153(-) | ||
Located in intron of: | ENSETEG00000007921 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC19 | ||
Ensembl ID: | ENSETEG00000006897 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528] |
Percent Identity: | 69.35 % |
Parental protein coverage: | 61.86 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | VLQAMKHVEPQVKQVFQSL-PKSAFSGGYYRG-GFEPKMTKREAALILGVSPTANKGKIRDA |
VLQA.KHVEP.VKQV.Q.L.P..A..G.YYRG..FEP.MTK.EA.LIL.VSPTANKG..R.A | |
Retrocopy | VLQAVKHVEPPVKQVCQTL<PNAASPGVYYRG>EFEP*MTKWEASLILSVSPTANKGQPRNA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |