RetrogeneDB ID: | retro_etel_406 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6830:48547..48919(-) | ||
Located in intron of: | ENSETEG00000011100 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 89.6 % |
Parental protein coverage: | 97.66 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQ.FVKTLTGKTITLE.EPS.TIENVKAKIQDKEGIP.DQQRLIFAGKQLEDGRTLSDYNIQ.ESTLHL. | |
Retrocopy | MQMFVKTLTGKTITLEAEPSETIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQRESTLHLM |
Parental | LRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKK |
LRL.GGIIE.SLRQLAQKYNCDKMIC.KC.ARLHPRAVNC..KKCGHTNNL.PKK | |
Retrocopy | LRLHGGIIELSLRQLAQKYNCDKMICHKCCARLHPRAVNC-CKKCGHTNNLCPKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |