RetrogeneDB ID: | retro_etel_408 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6858:9636..10140(+) | ||
Located in intron of: | ENSETEG00000018974 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5F1 | ||
Ensembl ID: | ENSETEG00000010713 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 [Source:HGNC Symbol;Acc:840] |
Percent Identity: | 78.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MLSRVVLSAAATAAPALKNAALLGPG-LQTARIFHTGQPSL-APVPPLPEYGGKVRFGLIPEEFFQFLYP |
ML.RV.LSA..TAAPALKNAALLGPG..QT.RIFHTGQPSL..PVPPLPEYGGK..F.LIPE.FFQ.L.P | |
Retrocopy | MLLRVILSATTTAAPALKNAALLGPGAVQTPRIFHTGQPSL<SPVPPLPEYGGKDPFRLIPEKFFQLLHP |
Parental | KTGVTGPYMLGTGLILYFLSK-EIYVVTAETFSSIATIGLLIYGIK-KYGPSVAEFADKLNEDKLAKLEE |
KTGVTGP.ML..GL...F..K.EIYVVTAETFS.IAT.GLLIYGI..KYGPSVAEFADKLNEDK.A..EE | |
Retrocopy | KTGVTGPSML--GLFYIFCAK<EIYVVTAETFSNIATVGLLIYGIT<KYGPSVAEFADKLNEDKIAEREE |
Parental | AKQASIKSIQDAIDMEKAQQALVQKRHYLFDVQR |
.KQASIK.IQDA.DMEKAQQ.LVQK.H.L.DVQR | |
Retrocopy | VKQASIKGIQDAKDMEKAQQSLVQKGHPLVDVQR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |