RetrogeneDB ID: | retro_etel_414 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6895:40180..40603(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000016379 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.45 % |
Parental protein coverage: | 89.31 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | SAKEKSRCEDMAKSDKARYDRYMNYVPPKGDKKGKK-KDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSI |
SAKEKSR.....K..........N.VPP.GDKKGKK.K.P...K..PSAFFLFCSE.R.KIK.EHPGLSI | |
Retrocopy | SAKEKSRLQKCNK*QISCDREMKNDVPPRGDKKGKK>KSPRLLK--PSAFFLFCSERRAKIKGEHPGLSI |
Parental | GDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAA-YRAKGKSEAGK-KGPGRPTGSKKKNEPEDE |
.D.AKK.GEMWSE...KDKQP.EQKAAK.KE.YEKD.A......G.S.A...KGPGRPTGSKKK.E.E.E | |
Retrocopy | VDPAKKSGEMWSE*PGKDKQPREQKAAKRKEEYEKDVAVRILCPGQSQAER<KGPGRPTGSKKKDESEEE |
Parental | EEEEE |
.EE.E | |
Retrocopy | AEEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |