RetrogeneDB ID: | retro_etel_456 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7571:201228..201614(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SAP18 | ||
Ensembl ID: | ENSETEG00000005565 | ||
Aliases: | None | ||
Description: | Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] |
Percent Identity: | 67.69 % |
Parental protein coverage: | 83.66 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | CPLLL-RVLTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFT |
CPLLL.RV..T..GR.H.MD.FS...V..SE.QI.TW.DATL.EL.SL..EVYPEARKKGTHF.FAIVFT | |
Retrocopy | CPLLL*RVFNTHKGRCHLMDKFSLRDVAPSERQICTWLDATLRELPSLGREVYPEARKKGTHFDFAIVFT |
Parental | DLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPP-NRAPPPSGRMRPY |
..KRPG...K..GS....RKG..DSM.L.SQKFQIG..LDIAITPP...APP.SGRMRPY | |
Retrocopy | NRKRPGDPIKDMGSSTLERKGIKDSMNL*SQKFQIGHSLDIAITPP<SQAPPLSGRMRPY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |