RetrogeneDB ID: | retro_etel_467 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7727:87390..87796(-) | ||
Located in intron of: | ENSETEG00000004076 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 69.34 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKS |
M.KFMKPGK.VLVLAG..SG.K..............P.SHALVAGI..YP.K.T.AM.KKKIAKRSK.KS | |
Retrocopy | MSKFMKPGKMVLVLAGCCSGHKLLSCRILMVP*TAPPPSHALVAGINCYPGKETDAMSKKKIAKRSKMKS |
Parental | FVKVYNYNHLMPTRYSVDI-PLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF |
FVKV....HLMPTRYSVDI.P..K.V.NKDV.RDPALK.K..REAKVK.E.RYKTGKNKWFFQKLRF | |
Retrocopy | FVKVLDDHHLMPTRYSVDI>PWTKRV-NKDVCRDPALKHKVCREAKVKCEGRYKTGKNKWFFQKLRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |