RetrogeneDB ID: | retro_etel_494 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8227:590046..590300(+) | ||
Located in intron of: | ENSETEG00000011546 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 75. % |
Parental protein coverage: | 95.51 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKA-PKSACGVCPGRLRG-VRAVRPKVLMRLSK-TK |
LTY..RLSYNTASN.T.LS..P.NRIVYLYTKKVG.A..KSACG.CPG.L.G.VR.VRPKVL.RLSK..K | |
Retrocopy | LTY*CRLSYNTASNETGLSQPPKNRIVYLYTKKVGNA<TKSACGMCPGPLPG>VRVVRPKVLVRLSK<SK |
Parental | KHVSRAYGGSMCAKCVRD |
.HVSR..GGSMCAKCV.D | |
Retrocopy | NHVSRPCGGSMCAKCVQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |