RetrogeneDB ID: | retro_etel_524 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8745:17895..18181(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000014762 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C1D | ||
Ensembl ID: | ENSETEG00000014857 | ||
Aliases: | None | ||
Description: | C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:29911] |
Percent Identity: | 87.5 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIREHMNRVKEITDKKKASKLDKGAASR |
LDPL.QAKVDLVSA.T..SMF.VYLATQG.NPKE.PVKQELE.IREHMNRVKEITDKK.ASKLDKG.ASR | |
Retrocopy | LDPLKQAKVDLVSACT*KSMFGVYLATQGANPKEYPVKQELE*IREHMNRVKEITDKKNASKLDKGTASR |
Parental | FVKNALWEPKPKIASKVAKKG-KSKT |
FVKNALWEPKPKIASKVA.KG.KSKT | |
Retrocopy | FVKNALWEPKPKIASKVAQKG>KSKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |