RetrogeneDB ID: | retro_etel_532 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8845:296342..296841(+) | ||
Located in intron of: | ENSETEG00000003017 | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000003024 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.43 % |
Parental protein coverage: | 66.94 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KKAAPAVPET-LKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIRMARMAR |
....PAVP...LKKKRRNF.E.KIKRLRK.FAQKML..AR.K.IYEKAKHYHKEYRQMYRTEIR.ARMAR | |
Retrocopy | EEKVPAVPDS>LKKKRRNFTERKIKRLRK*FAQKMLQKARKKFIYEKAKHYHKEYRQMYRTEIRIARMAR |
Parental | KAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYIAWGYPN |
KAG.FYVPGEPKLAFVIRIRGIN.VSPKV.KV.QLL.L.QIFN..FVKLNKASINMLRIVEPYIAWGYP. | |
Retrocopy | KAGSFYVPGEPKLAFVIRIRGINSVSPKV*KV*QLLHLCQIFNDTFVKLNKASINMLRIVEPYIAWGYPT |
Parental | LKSVNELIYKRGYGKINKKRIALTDNT |
LKSVNELIYKRG.GKI.KKRIALTDNT | |
Retrocopy | LKSVNELIYKRGDGKITKKRIALTDNT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |