RetrogeneDB ID: | retro_etel_556 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_9032:67972..68383(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSETEG00000007922 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 58.16 % |
Parental protein coverage: | 69.35 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | IIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKE-GGLGP-MNIPLVSDSKRTIAQDYGVLKVDE |
....S..A..F.KL.C.V.G.S.D..F.HL.WINTP.KE.GGLGP..NIPL.....R....DYG.L..DE | |
Retrocopy | LLSVSMHAGDFYKLGCKVLGVSMDFQFTHLTWINTPQKE<GGLGP<LNIPLLANVTRSLCHDYGMLNEDE |
Parental | GISFRGLFIIDDK-GILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSR |
G...RGLFIID.K.G.L.QITVNDLPVG.SVDE.LRL.Q.F...D.H..V.PAGWKPG.DT.KP.V.... | |
Retrocopy | GTIYRGLFIIDAK<GVLHQITVNDLPVGYSVDEALRLIQVFHHMDEHR*VYPAGWKPGIDTAKPNVEENK |
Parental | E |
E | |
Retrocopy | E |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |