RetrogeneDB ID: | retro_etel_562 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_9065:138486..138923(+) | ||
Located in intron of: | ENSETEG00000011199 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UFC1 | ||
Ensembl ID: | ENSETEG00000015730 | ||
Aliases: | None | ||
Description: | ubiquitin-fold modifier conjugating enzyme 1 [Source:HGNC Symbol;Acc:26941] |
Percent Identity: | 64.1 % |
Parental protein coverage: | 92.81 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MADEATRRVVSEIPVLKTGAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLESNREGTRWFGKCW |
M.DEAT..VV.EIPVLK....P.........L.E.YQSLI.YVENNKN.DN.WF.LESN..G....GKC. | |
Retrocopy | MTDEATQHVVPEIPVLKM-PDPKILDCECSELEE-YQSLIWYVENNKNMDNEWF*LESNK*GIWCSGKC* |
Parental | YIHDLLKYEFDIEFDIPITYPTTAPEIAIPELDGKTAKMYRGGKICLTDHFK-PLWARNVPKFGLAHLMA |
Y.H..LKYEFDI.....I.YPTT.PE.AIPELDGK...M.RGG.ICLTDH.K..LWARN.PKF.LAHLMA | |
Retrocopy | YNHNILKYEFDIR----IIYPTTVPESAIPELDGK---MCRGGTICLTDHLK<ALWARNTPKFELAHLMA |
Parental | LGLGPWLAVEIPDLIQ |
LGL...LAVEI.D.IQ | |
Retrocopy | LGLDL*LAVEIQDGIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |