RetrogeneDB ID: | retro_etel_569 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_9101:119423..119814(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000003231 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | POP5 | ||
Ensembl ID: | ENSETEG00000009283 | ||
Aliases: | None | ||
Description: | processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:17689] |
Percent Identity: | 88.55 % |
Parental protein coverage: | 76.79 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MVRFKHRYLLCELVSDDPRCRLSLEDRVLDGLVRDTITRVHGTFGAAACSIGFTVRYLNAYTGVVLLRC- |
MVRFKHRYLLCELVSDDP.CR.SLEDRVLDGLV.DTITR..GTF.AAACSIGF.VRYLNAYTGVVLLRC. | |
Retrocopy | MVRFKHRYLLCELVSDDPCCRVSLEDRVLDGLVWDTITRGLGTFSAAACSIGFAVRYLNAYTGVVLLRC> |
Parental | RKDFYQLVWSALPFIT-MENKGHRYPCFFNTLXXXGTIRTCQKFLIQYNRRQLLVLLQNCT |
R.DFYQLVWSALPFIT..ENKGH.YPCFFNTL...GTIRTCQKFLIQYNRRQLLVLLQNCT | |
Retrocopy | RQDFYQLVWSALPFITYLENKGHCYPCFFNTLHVGGTIRTCQKFLIQYNRRQLLVLLQNCT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000012668 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000009283 | 1 retrocopy |
retro_etel_569 ,
|
Tarsius syrichta | ENSTSYG00000006138 | 1 retrocopy |