RetrogeneDB ID: | retro_etel_584 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_920:683186..684584(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CS | ||
Ensembl ID: | ENSETEG00000012035 | ||
Aliases: | None | ||
Description: | citrate synthase [Source:HGNC Symbol;Acc:2422] |
Percent Identity: | 99.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MALLTAAARLFGAKNASCLVLAARHASASSTNLKDVLADMIPKEQARIKTFRQQHGKTVVGQITVDMMYG |
MALLTAAARLFGAKNASCL.LAAR.ASASSTNLKDVLADMIPKEQARIKTFRQQHGKTVVGQITVDMMYG | |
Retrocopy | MALLTAAARLFGAKNASCLILAARRASASSTNLKDVLADMIPKEQARIKTFRQQHGKTVVGQITVDMMYG |
Parental | GMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKLLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSKE |
GMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKLLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSKE | |
Retrocopy | GMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKLLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSKE |
Parental | WAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWELIYEDCMDLISKLP |
WAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWELIYEDCMDLISKLP | |
Retrocopy | WAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWELIYEDCMDLISKLP |
Parental | CVAAKIYRNLYREGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGS |
CVAAKIYRNLYREGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGS | |
Retrocopy | CVAAKIYRNLYREGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGS |
Parental | ALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTHLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVL |
ALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTHLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVL | |
Retrocopy | ALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTHLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVL |
Parental | RKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPDVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYY |
RKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPDVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYY | |
Retrocopy | RKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPDVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYY |
Parental | TVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTEGLLKFVESKSG |
TVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTEGLLKFVESKSG | |
Retrocopy | TVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTEGLLKFVESKSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |