RetrogeneDB ID: | retro_etel_590 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_100081:52..286(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CKS2 | ||
Ensembl ID: | ENSETEG00000001260 | ||
Aliases: | None | ||
Description: | CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000] |
Percent Identity: | 88.61 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAHKQIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFR |
MAHK.IYYSDKYFDEHYEY.HVMLPR...KQVP.THLM.EEEWRRLGVQQSLGWVHYM.HEPEPHILLFR | |
Retrocopy | MAHKKIYYSDKYFDEHYEYQHVMLPR-VPKQVPQTHLMPEEEWRRLGVQQSLGWVHYMTHEPEPHILLFR |
Parental | RPLPKEQQK |
.PLPKEQQK | |
Retrocopy | *PLPKEQQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |