RetrogeneDB ID: | retro_etel_592 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_100372:735..1131(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000008893 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000008035 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55.88 % |
Parental protein coverage: | 98.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | GRVRTKTVKKAARVIIEKYYTR-LGNDFHTNKRVCEEIAIIPSKKLRNKI-AGYVTHLMKRIQRGPVRGI |
G.V.T...KK.A.VII.KYY...L..DFHTNK...EEIAII.S.K.RN....GY.THL.K.IQR...RGI | |
Retrocopy | GHVHTTIMKKSAWVIIQKYYNT>LSKDFHTNKHM*EEIAIILSRKFRNRK>RGYATHL-KQIQRSFMRGI |
Parental | SIKLQEEE-RERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGA |
SIK...EE.R..........S......I.VDPD.KE.L..L.FGS.S.LQV.Q.TV.MNFKTPRGA | |
Retrocopy | SIKM-QEE>RKKGEKTAFLRSTPEEKSIVVDPDSKEILMILNFGSRSILQVIQHTVRMNFKTPRGA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |