RetrogeneDB ID: | retro_etel_6 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_250564:3428..4109(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000007209 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1E1 | ||
Ensembl ID: | ENSETEG00000019283 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 [Source:HGNC Symbol;Acc:857] |
Percent Identity: | 74.11 % |
Parental protein coverage: | 99.12 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKI |
MALSD.DVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKI.EYYEKKEKQIEQQKKI | |
Retrocopy | MALSDVDVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKILEYYEKKEKQIEQQKKI |
Parental | QMSNLMNQARLKVLRARDDLIMGLLSEAKQRLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQD |
QMS...NQARL.VLRARDDLI..LL.EAKQRLS..V.D...YQ.LL..L.LQ.L..LLEPR..VRCR.QD | |
Retrocopy | QMSTVRNQARLTVLRARDDLITDLLKEAKQRLSRIVMDVQVYQGLLEKLLLQSLFRLLEPRVLVRCRPQD |
Parental | FPLVKAAVQKAIPMYKIATKKDVDVQIDQETYLPEDIAGGVEICNGDRKIKVSNTLESRLDLIAQQMMPE |
..L...A...AI..Y..AT.K.V...ID.E..LP.D.AGGVE......KIKVSNTLESRLDL.AQQ.MPE | |
Retrocopy | VFLLQGALPRAISEYMKATHKTVEIHIDREVHLPGDSAGGVEAYSDGQKIKVSNTLESRLDLLAQQRMPE |
Parental | VRGALFGANANRKF |
.R.ALFGANANR.F | |
Retrocopy | IRKALFGANANRRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |