RetrogeneDB ID: | retro_etel_625 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_104369:99..364(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MRPS36 | ||
Ensembl ID: | ENSETEG00000019493 | ||
Aliases: | None | ||
Description: | mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:16631] |
Percent Identity: | 61.54 % |
Parental protein coverage: | 90.82 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | GSKMASASRVVQVVKPHTPLIRFPDRTDNPKLNVPEALRSSGIPPPSSVMSQHSMGSK-APDSLMQ-QGP |
GS.MAS.SRV.QV.KPHTPLIRFPD...NP.LN.PE.LRS.G.P...S..SQ.S.G....PD.LM...GP | |
Retrocopy | GSTMASTSRVIQVAKPHTPLIRFPD*SGNPNLNGPEPLRSVGMPSHASARSQRSLGWE<TPDWLMH<SGP |
Parental | PDTAEIIKTLPQKYRRKPVSQ |
PD.AEIIK.L.QK.R...VS. | |
Retrocopy | PDSAEIIKALRQK*RETRVSR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |