RetrogeneDB ID: | retro_etel_637 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_11856:4091..4391(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL35 | ||
Ensembl ID: | ENSETEG00000000876 | ||
Aliases: | None | ||
Description: | ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] |
Percent Identity: | 73.27 % |
Parental protein coverage: | 82.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRK |
AK.KARDLRGKKKEE.L.QLDDLKVELSQLRVAKVTG.AASKLSKIR.V.KSIARV.TVINQT.K.NLR. | |
Retrocopy | AKRKARDLRGKKKEEVLIQLDDLKVELSQLRVAKVTGCAASKLSKIRAVCKSIARVRTVINQT*KANLRQ |
Parental | FYKGKKYKPLDLRPKKTRAMRRRLNKHEESL |
F.KGKK.KPLDLR.........R.....E.L | |
Retrocopy | F-KGKKGKPLDLRAMHEQSPKTRTQQRKERL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |