RetrogeneDB ID: | retro_etel_639 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_121269:259..706(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 76.47 % |
Parental protein coverage: | 95.54 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | SPATAPHP-LKMYACA-KFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRS |
SP.TAPHP.LKMY.CA.KFVST.SLVRSTS.LL..PLSVLVQK.PETL.DERFSSLT..RS.TS..P... | |
Retrocopy | SPETAPHP<LKMYVCA<KFVSTLSLVRSTSHLLTQPLSVLVQKQPETLTDERFSSLTVSRSLTSELPVTA |
Parental | FQ-TSTVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMG |
F...S..SRDI.TAAKFIG.GAATVGVAGSGAG.GT.FG.LI.GY.RNPSLKQQLFSY.IL.FA.S..MG | |
Retrocopy | FK<ASIISRDIGTAAKFIGPGAATVGVAGSGAGNGTGFGNLILGYGRNPSLKQQLFSYIILCFAFSKTMG |
Parental | LFCLMVAFLILFA |
.FCLMVAFLILFA | |
Retrocopy | HFCLMVAFLILFA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |