RetrogeneDB ID: | retro_etel_648 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_12750:6047..6270(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPG | ||
Ensembl ID: | ENSETEG00000010028 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163] |
Percent Identity: | 84.42 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MSKAH-PPELKKFMDKKLSLKLNGGRHVQGILRGF-DPFMNLVIDECVEMATSGQQNNIGMVVIRGNSII |
MSKAH..PELKK..DKKLSLKLNGGRHV.GILRG..DPFMNLVI.ECVEMATSGQQN.IG.VVIRGNS.I | |
Retrocopy | MSKAH<SPELKKCVDKKLSLKLNGGRHVKGILRGV<DPFMNLVIGECVEMATSGQQNSIGVVVIRGNSVI |
Parental | MLEALER |
MLEA.ER | |
Retrocopy | MLEAWER |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |