RetrogeneDB ID: | retro_etel_652 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_130489:415..866(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 72.26 % |
Parental protein coverage: | 96.18 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | SPATAPHPLKMYACA-KFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSF |
SP.TAPHPLKMYACA.KFVST.SLV.STS.LL.RP.SVL.QK.PETL.DE..SSLTA..S.TSL.PSRSF | |
Retrocopy | SPDTAPHPLKMYACA<KFVSTLSLVKSTSKLLTRPFSVLEQKQPETLTDEHVSSLTALHSLTSLIPSRSF |
Parental | QTSTVSRDIDTAAKFIG-AGAATVGVAGSGAGIGTVFG-SLIIGYARNPSLKQQLFSYAILGFALSEAM- |
..ST.SRDIDT..KFIG..GAATVGV.GSG..I....G..LI.GY.R.PSLKQQL.SY.ILGFA.S..M. | |
Retrocopy | *ASTISRDIDTGVKFIG<GGAATVGVVGSGVSIEMGLG<NLILGYPRTPSLKQQLLSYIILGFAFSKTM> |
Parental | GLFCLMVAFLILFAM |
GLFCLMVAFLI.FA. | |
Retrocopy | GLFCLMVAFLIFFAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |