RetrogeneDB ID: | retro_etel_66 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_1116:157770..158086(-) | ||
Located in intron of: | ENSETEG00000002459 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSETEG00000003463 | ||
Aliases: | None | ||
Description: | ribosomal protein L37 [Source:HGNC Symbol;Acc:10347] |
Percent Identity: | 79.25 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LWSRPQKRDDE-GNVILRKAN-KTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT |
LWS.P.K.DDE.G...L.K....THTL.RRCGSKA.HLQKSTCGKCG.PAKRK..YNWSAKAKRRNTTGT | |
Retrocopy | LWSPPRKQDDE>GTPSLGKRHIQTHTLGRRCGSKACHLQKSTCGKCGCPAKRKGRYNWSAKAKRRNTTGT |
Parental | GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAASSSS |
G.MRHLKI.Y.RFRHGFREGTTP..KRAAVAASSSS | |
Retrocopy | GQMRHLKIGYCRFRHGFREGTTPNLKRAAVAASSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |