RetrogeneDB ID: | retro_etel_684 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_143765:203..656(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000001342 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000006010 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.5 % |
Parental protein coverage: | 92.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 6 |
Parental | MASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVL-FCLSDDKRQIIVEEAKQILVGDIG-ETVEDPY |
MASGVTVNDEVIKVFNDMKVRKSSTQE.IKKR..AVL.FCLSDDKRQIIVEEAKQILVGDIG...VEDPY | |
Retrocopy | MASGVTVNDEVIKVFNDMKVRKSSTQEKIKKRNTAVL>FCLSDDKRQIIVEEAKQILVGDIG>DAVEDPY |
Parental | TS-FVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSK-MIYASSKDAIKKKFTGIKHEWQ |
TS.FVKLLPLNDC.YAL......T..S.......I..A.....LK...MI.ASSKD..KKKFT..KH.WQ | |
Retrocopy | TS>FVKLLPLNDCQYALSE----TRGSERRPSIYIL-ASCKCTLKKQ>MIAASSKDPLKKKFTSMKHGWQ |
Parental | VN-GLDDIKD-RSTLGEKLG |
VN.GLD.I.D.RSTLGEKLG | |
Retrocopy | VN>GLDNIED>RSTLGEKLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |