RetrogeneDB ID: | retro_etel_7 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_23311:3..675(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000007917 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000019235 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.11 % |
Parental protein coverage: | 85.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LVSSVHGVLATGSGIVVIYSCRDVMTDRHWLAREYVWFLIPYMLYDTYAMYLCEWYKIKEENRRHSLATF |
LVSSVHGVLATGSGI..IYSCRDVMTDRHWLAREYVWFLIPYMLYDTY..YLCEWYKIKEENRRHSLATF | |
Retrocopy | LVSSVHGVLATGSGIIIIYSCRDVMTDRHWLAREYVWFLIPYMLYDTYTLYLCEWYKIKEENRRHSLATF |
Parental | QSFLIKNRLMLTHHAVILFALVPVAQRLRGDLGDFFVGCIFTAELSTLFVSLGRVLIQ-AQQHTLLYKVN |
Q.F..KNRLMLTHH.VIL.ALVPVAQRLRGDLGDFFVGCIF.AELST.FVSLGRVLIQ..QQHTLLYKVN | |
Retrocopy | QNFPSKNRLMLTHHVVILLALVPVAQRLRGDLGDFFVGCIFKAELSTPFVSLGRVLIQLKQQHTLLYKVN |
Parental | GILTLATFFACRILLFPFMYWSYGQQQGLRLYQVPFHIPFHCNVA |
GIL.LATFFACR.LLFPF.YWSYGQQ.GL.LY.VPF.IPFH.N.A | |
Retrocopy | GILSLATFFACRLLLFPFVYWSYGQQKGLTLYKVPFPIPFHRNMA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000019129 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000019235 | 1 retrocopy |
retro_etel_7 ,
|
Loxodonta africana | ENSLAFG00000017562 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000009347 | 1 retrocopy |