RetrogeneDB ID: | retro_etel_708 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_149710:517..981(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SAP18 | ||
Ensembl ID: | ENSETEG00000005565 | ||
Aliases: | None | ||
Description: | Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] |
Percent Identity: | 81.41 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAVESRVTQEEIKKEPEKPIDREKKCPLLLR-VLTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKEL |
.AVES.VTQEEIKK..EKPIDREK.C.LLL..V.T.N.GRHHRMDEFS.GNVPSSELQI.TWMDATLK.L | |
Retrocopy | VAVESSVTQEEIKKKTEKPIDREKTCLLLLLPVFTPNYGRHHRMDEFSGGNVPSSELQICTWMDATLKDL |
Parental | TSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQ-SQKFQIGD-YLDIAI |
TSL.KEVYPEARKKGTHFNF.IVFTDLK.PG.RVKEIGST..G.KGT.DSMTLQ.SQKFQ.GD.YLD.AI | |
Retrocopy | TSLGKEVYPEARKKGTHFNFEIVFTDLKIPGCRVKEIGSTILGKKGTNDSMTLQ>SQKFQMGD>YLDVAI |
Parental | TPPNRAPPPSGRMRPY |
TPPN..PPPSG.MRPY | |
Retrocopy | TPPNEPPPPSGHMRPY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |