RetrogeneDB ID: | retro_etel_735 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_156733:283..733(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 69.68 % |
Parental protein coverage: | 96.18 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | SPATAPHPLKMYACA-KFVSTPSLVRSTSQLLSR-PLSVLVQKRPETLSDERFSSLTAP-RSQTSLVPSR |
SP.T.PHPLKMYACA.KFVST.SLV.STSQLL...P.SVL.QK.PETL.DE....L..P..S.TSL.PS. | |
Retrocopy | SPDTSPHPLKMYACA<KFVSTLSLVKSTSQLLTS>PFSVLEQKQPETLTDEHL-QLDSP>HSLTSLIPSH |
Parental | SFQTSTVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFG-SLIIGYARNPSLKQQLFSYAILGFALSEAM |
SF..ST.SRDIDT..KF.G.GAATVGV.GSG.GI....G..LI.GY.R.PSLKQQL.SY.ILGFA.S..M | |
Retrocopy | SF*ASTISRDIDTGVKFVGTGAATVGVVGSGVGIEIGLG<NLILGYPRTPSLKQQLSSYIILGFAFSKTM |
Parental | GLFCLMVAFLILFAM |
GLFCLMVAFLILFA. | |
Retrocopy | GLFCLMVAFLILFAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |