RetrogeneDB ID: | retro_etel_736 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_156764:6..382(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 70.99 % |
Parental protein coverage: | 82.8 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SLVRSTSQLLS-RPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTSTVSRDIDTAAKFIGAGAA |
SLV.STS..L....LS.LV...PETL.DERFSSLTAP.S.TS..PSRSFQTS..SR..DTAAKF.G..AA | |
Retrocopy | SLVKSTSVRLN>QTLSALVLTQPETLTDERFSSLTAPCSLTSHIPSRSFQTSSMSRGTDTAAKFTGSRAA |
Parental | TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM |
TVGV.GS.AGIG....SLI.G.ARNP.LKQQLF.YA.LGFALSEAM.L.C.MVAFL.LFAM | |
Retrocopy | TVGVSGSRAGIG----SLILGDARNPALKQQLF-YASLGFALSEAMRLVCPMVAFLRLFAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |