RetrogeneDB ID: | retro_etel_738 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_157189:509..1105(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000015813 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAE | ||
Ensembl ID: | ENSETEG00000012056 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] |
Percent Identity: | 74.02 % |
Parental protein coverage: | 87.12 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | NVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVF |
NVI.ARRASWRIISS..Q.EENKGGEDKLKMIR.YRQMVETELKLIC..ILDVLD.HLIPAANTGE..VF | |
Retrocopy | NVIRARRASWRIISSVPQEEENKGGEDKLKMIRKYRQMVETELKLICRGILDVLDSHLIPAANTGEF*VF |
Parental | YYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDR |
Y.K..GDYHR.L..FA.G.DRK.AA.NSLVAYKAASDIA...LPPTHPIRLGLALNFSVF.YEIL.SPD. | |
Retrocopy | Y*KTTGDYHRDLTAFAPGTDRKGAAKNSLVAYKAASDIAVAALPPTHPIRLGLALNFSVFHYEILHSPDC |
Parental | ACRLAKAA-FDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDE |
ACRLAKAA.FDDA.AE.DTLSEESYKDSTL.....R.......SD.....E.....A.Q.VEDE | |
Retrocopy | ACRLAKAA<FDDAVAERDTLSEESYKDSTLVLRGHRHYGLQTRSDGEEQNED----ARQGVEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |