RetrogeneDB ID: | retro_etel_758 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_159368:5674..6158(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000007560 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.8 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHKDDPPP |
MPSIKL..SDGEIFEV.V.IAKQSV.IKTMLEDL.MD.EGDDDPVPLPNVNAAILKKVIQWC....D.PP | |
Retrocopy | MPSIKLHNSDGEIFEVSVGIAKQSVPIKTMLEDLEMDAEGDDDPVPLPNVNAAILKKVIQWCIQHKDNPP |
Parental | PEDDENKEKRT-DDIVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI |
PEDD.NKEKRT.D..VWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT.ANMIKGKT.EEIRKTF.I | |
Retrocopy | PEDDKNKEKRT>DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTFANMIKGKTAEEIRKTFSI |
Parental | KNDFTEEEEAQVRKENQWCEEK |
KN.F.EEEEAQVRKE..WCEEK | |
Retrocopy | KNNFNEEEEAQVRKES*WCEEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |