RetrogeneDB ID: | retro_etel_771 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_162165:4036..4302(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2B | ||
Ensembl ID: | ENSETEG00000006522 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2B [Source:HGNC Symbol;Acc:12473] |
Percent Identity: | 58.7 % |
Parental protein coverage: | 58.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | WNAVIFGPEGTPF-EDGTFKLVIEFSEEYPNK-PPTVRFLSKMFHPNVHADGSICLDILQNQWSPTYDV- |
WN..IF.PE.T....D.T.K.V...SEEYPNK..P.V.FLSKMFHPN....GS..LDILQN.W.PT.... | |
Retrocopy | WNTLIFEPEKTSL<DDNTLKPVVKISEEYPNK<TPAVKFLSKMFHPNGYVRGSKYLDILQNRWTPTCSI> |
Parental | SSILTSIQSLLDEPNPNSPANS |
SSI.TSI.SLL.EPN.N....S | |
Retrocopy | SSISTSIWSLLGEPNLNCLGSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |