RetrogeneDB ID: | retro_etel_774 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_162447:5059..5336(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSETEG00000003715 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 67.74 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSK- |
MVQ.LT...RLSYNT..NKTRLSR.PGN.IVYLYTKK..K.PKS.C.VC.G...GV.AVRPK.....SK. | |
Retrocopy | MVQCLT*KHRLSYNTTANKTRLSRNPGNKIVYLYTKKISKIPKSTCFVCLG*F*GVCAVRPKFCRDSSKQ |
Parental | -TKKHVS-RAY-GGSMCAKCVRD |
..K.HVS.RAY.GGSMCAKC.RD | |
Retrocopy | QPKNHVS>RAYDGGSMCAKCARD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |