RetrogeneDB ID: | retro_etel_775 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_162544:2897..3303(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 73.38 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDR-PYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIK |
.GKFMKP.KVVL.LAG.YSG.KA..VK.IDDG.S...PYSHALVAGID.YP.KVT.AMGKK.IAKRSKIK | |
Retrocopy | LGKFMKPRKVVLLLAGCYSGCKAINVKTIDDGLSGH>PYSHALVAGIDSYPHKVTGAMGKKNIAKRSKIK |
Parental | SFVK-VYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARRE-AKVKFEERYKTGKNKWFFQKLRF |
S.VK.VYNY.HLMP.RYSVDI.LDKT...KD.FR.PALK.KA.....KVKF.ERYK.GK.KWF.QKL.F | |
Retrocopy | SVVK<VYNYKHLMPSRYSVDILLDKTAF-KDAFREPALKSKAHQR>GKVKFDERYKVGKHKWFLQKLQF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |