RetrogeneDB ID: | retro_etel_793 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_164920:2036..2477(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000001678 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.67 % |
Parental protein coverage: | 59.68 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | VSPKVRKVLQLLRLRQIFNGAFVKL-NKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIAL |
V.PKV.KVL.L..L.Q.FN..FVK..NKAS.NMLR.VEPYIAWG.......NEL.YK...GKI..K.IAL | |
Retrocopy | VCPKV*KVL*LVLLHQSFNSNFVKA>NKASMNMLRMVEPYIAWGTQTGR-LNELTYKVDDGKISQKQIAL |
Parental | TDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKK-KTTHFVEGGDAGNRED |
TD.TLIARSL.KYGI..MEDLIH.IY.VG...KE.NNF.W..K..SP..GMKK.KT.HFVEGGDAGNRED | |
Retrocopy | TDSTLIARSLCKYGIVWMEDLIHKIYIVGEYYKEENNFWWSLK*FSPQCGMKK<KTSHFVEGGDAGNRED |
Parental | QINRLIRRMN |
.I..LIR.MN | |
Retrocopy | KIHKLIRKMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |