RetrogeneDB ID: | retro_etel_797 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_165208:7480..7900(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013764 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.14 % |
Parental protein coverage: | 89.24 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MAEQAPKSVLFVCLGNICRSPIAEAVFRKLVTDQNLLDKWIIDSGAV-SDWNVGRSPDPRAVSYLGSHDI |
MA.Q.PKSVL.VCLGNIC.SPIA.A.FRK.VTDQNLLDKW.I.S.A..S....G..P..........H.. | |
Retrocopy | MAVQGPKSVLSVCLGNICQSPIAKAIFRKFVTDQNLLDKWRIGSAAT>SM*EIGNPPGYQRQNCMKQHGL |
Parental | NSAHKARQITKEDFATFDFILCMDESNLRDLTRKGNQVK-NCKAKIELLGNYDPQKQVIIEDPYYGNDSD |
.....A..I.KEDFAT.D.I.CMD.SNL.D..RKGNQVK.N.KA.IEL.G.YD.....I.EDPY.GNDSD | |
Retrocopy | P*V-SAPEIAKEDFATLDYIPCMDDSNL*DVARKGNQVK<NGKATIELRGSYDRPE*LIREDPYHGNDSD |
Parental | FET |
FET | |
Retrocopy | FET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |