RetrogeneDB ID: | retro_etel_804 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_166416:1924..2400(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSETEG00000011923 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 71.25 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGT-VIHF |
MNQEKL.KLQAQV.IG.KGT..R..KV.HRT.T.DDKKLQ.SL.KL.VNNI..IEE.NMIK.DGT..IHF | |
Retrocopy | MNQEKLGKLQAQVQIGDKGTDHRSMKVIHRTGTVDDKKLQRSLLKLSVNNISDIEEINMIKGDGT<TIHF |
Parental | NNPKVQASL-SANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNETPKPEDIDEE |
........L.S..T..ITGHAEAKP.TEM.P.ILSQL.ADS.TS.RK.AE.FPRQVLDN.TPK.EDIDEE | |
Retrocopy | ISTISRYKLPSLLTRVITGHAEAKPSTEMVPEILSQLVADSFTSPRK*AEHFPRQVLDNKTPKTEDIDEE |
Parental | DDDVXXLVENFDEASKNEAN |
DDDV..LVENFD.A.KNEAN | |
Retrocopy | DDDVPDLVENFDGALKNEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |