RetrogeneDB ID: | retro_etel_818 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_168568:1329..1762(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 52.98 % |
Parental protein coverage: | 52.69 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | AARKESKGPGKKQKVRTVFSQTQ-LCILKDHFQKQKYLSLQQMQELSEVLNLSYKQVKTWFQNQRMKCKR |
A..K..K..G..QK.R.VFS....LCILKD.FQKQK.LSLQQMQELSE.LNL.Y.Q..T........... | |
Retrocopy | AEKKQNKEVGMGQKIRSVFSHIL>LCILKDRFQKQKELSLQQMQELSEALNLIYLQLMT--RTRQ*NVRD |
Parental | WQKTTNWSKN-NHAVTQKVSAPTEYLDVCASYHQGCLPSGN-LPMWSNQSWNSQAWNNQ-SWNSQAWNNQ |
...T..WSK...H.VTQK....TEYL..C....QG.LP....L..WSNQ...SQAWNN..SWNSQA...Q | |
Retrocopy | VRQTAKWSKD>SHNVTQK--GLTEYLTHCV*SYQGYLPTRHTLMTWSNQA*ASQAWNNR<SWNSQARSIQ |
Parental | SWNSQAWNNQT |
..NS..WN.QT | |
Retrocopy | NCNS*VWNSQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |