RetrogeneDB ID: | retro_etel_829 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_171460:4260..4533(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 76.6 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCG-KTKMKRRAVGIWHCGSCMKTVAGGAW |
MAK.TKKVGIVGKYGT.YGASLRKMVKKIEISQHAKYTCSFCG.K........G.WH.G.CMKTVAGG.W | |
Retrocopy | MAKHTKKVGIVGKYGTCYGASLRKMVKKIEISQHAKYTCSFCG<KNQNEETRCG-WHYGFCMKTVAGGVW |
Parental | TYNT-TSAVTVKSAIRRLKELKDQ |
.Y...TSAVT.K.AIR.LKELKDQ | |
Retrocopy | IYTS>TSAVTIKCAIRKLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |