RetrogeneDB ID: | retro_etel_839 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_173381:4314..4847(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000807 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.32 % |
Parental protein coverage: | 84.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | PPVQIHGVEGRYATALYSAASKQNKLEQVEKELLRVAQLLKDPKVALAILNPHVKRSIKVKSLSDITAKE |
PPVQIH.VE..YATALYSAASKQNKL.QVEKELLRVAQLLKDPKVALAILNPHVKRS.KVKSLSDITAKE | |
Retrocopy | PPVQIHSVESHYATALYSAASKQNKLDQVEKELLRVAQLLKDPKVALAILNPHVKRSVKVKSLSDITAKE |
Parental | RLSPITTNLINLLAENGRLNNAPGVISAFS-TIMSVHRGEVPCTVTTASS-LDNTSLSELKTVLNSFLSQ |
RLSPIT.NLINL.AENG.LNN.P.VI.AF..TIMS.H..EVPCTVTTAS....N.SLSELKTVL.SFLSQ | |
Retrocopy | RLSPITSNLINLFAENGCLNNIPVVILAFF>TIMSIHHREVPCTVTTASP>IGNASLSELKTVLYSFLSQ |
Parental | GQVLKLEVKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSRII |
GQ.LKLEVKTDPSIMGG....I..KY.DMSAK.KI.KLSR.. | |
Retrocopy | GQALKLEVKTDPSIMGGI---IRGKYMDMSAKFKIKKLSRVM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |