RetrogeneDB ID: | retro_etel_911 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_183788:5157..5412(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SPA17 | ||
Ensembl ID: | ENSETEG00000007789 | ||
Aliases: | None | ||
Description: | sperm autoantigenic protein 17 [Source:HGNC Symbol;Acc:11210] |
Percent Identity: | 74.12 % |
Parental protein coverage: | 86.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LEGLTRNL--REPDNIP-FAAAY--ELLENREKTNFDPAE-GAKVDDRFYNNHAFNEQEPPEKDVPEK-K |
LEGLT.......PDNIP.F.AAY...LLE.REKTNFDPAE.GAKVDD.FYNNHAF.EQEP.E.DVPEK.K | |
Retrocopy | LEGLTQEILREQPDNIPAFTAAYFENLLEKREKTNFDPAEWGAKVDDHFYNNHAFKEQEPLEQDVPEKEK |
Parental | SQESVNKEETPVTVL |
SQESVN.EETPV..L | |
Retrocopy | SQESVNEEETPVIAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000007961 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000007789 | 1 retrocopy |
retro_etel_911 ,
|
Homo sapiens | ENSG00000064199 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000003757 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000008480 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000007436 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000004017 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000004426 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000008379 | 1 retrocopy |