RetrogeneDB ID: | retro_etel_919 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_184803:2434..2977(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000006941 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.64 % |
Parental protein coverage: | 80.27 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RSSRIWVHPTPAASAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAK--ATGDW |
...RIWVHPTPAASAMPPKFDP.EIKV.YLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIA.....GD. | |
Retrocopy | KAMRIWVHPTPAASAMPPKFDPKEIKVEYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAEQPVSGDG |
Parental | KGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNVTFDEIVGIARQMRHRSLAR |
KGLR.TVK.T.Q.RQAQIEVVPSASAL.IKALKEPPRDRKKQKN.KH.GNVTFDEIV.IARQMRHRSLAR | |
Retrocopy | KGLRVTVKWTVQKRQAQIEVVPSASALTIKALKEPPRDRKKQKNSKHRGNVTFDEIVSIARQMRHRSLAR |
Parental | ELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPA |
.LSG..KEILGTAQSVG..VDGRHP.DIIDD.NSGAVECPA | |
Retrocopy | GLSGAVKEILGTAQSVG*SVDGRHPQDIIDDLNSGAVECPA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |