RetrogeneDB ID: | retro_etel_953 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_190352:4093..4535(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSETEG00000011923 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 66.22 % |
Parental protein coverage: | 92.41 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIK-DDGTVI-H |
MNQEKLA.LQAQV.IG.KGTA.R..K.VHRTAT.DDKKLQ.S..K.AVN.IAG.E..NMIK.D....I.H | |
Retrocopy | MNQEKLAELQAQVQIGDKGTAHRIMKLVHRTATVDDKKLQRSF*KFAVNKIAGNE*INMIKGDETPFI>H |
Parental | FNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDNETPKPEDIDEE |
FN....QA.LSA.TFAITGHAEAKP.TEM.P..LS.L.ADS.TS..K.AEQFPRQ.LD...PK.E.ID.E | |
Retrocopy | FNYFNIQAPLSAHTFAITGHAEAKPCTEMFPEMLSELVADSFTSPGK*AEQFPRQLLDSKAPKTEVIDME |
Parental | DDDVXXLV |
DDD..... | |
Retrocopy | DDDMFQIL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |