RetrogeneDB ID: | retro_etel_972 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_193640:3106..3568(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL3 | ||
Ensembl ID: | ENSETEG00000011380 | ||
Aliases: | None | ||
Description: | ribosomal protein L3 [Source:HGNC Symbol;Acc:10332] |
Percent Identity: | 98.05 % |
Parental protein coverage: | 54.42 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AFTKYCKKWQDDEGKKQLDKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGSVAEKLDWAR |
AFTKYCKKWQDDEGKKQLDKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGSVAEKLDWAR | |
Retrocopy | AFTKYCKKWQDDEGKKQLDKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGSVAEKLDWAR |
Parental | EKLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVAR |
EKLEQQVPVNQVFGQDEMIDVIGVTKGK.YKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA. | |
Retrocopy | EKLEQQVPVNQVFGQDEMIDVIGVTKGKSYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVAL |
Parental | AGQKGYHYRTEINK |
AGQKGYH.RTEINK | |
Retrocopy | AGQKGYHHRTEINK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |