RetrogeneDB ID: | retro_fcat_92 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | C1:27235920..27236247(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSFCAG00000029626 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000032037 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.42 % |
Parental protein coverage: | 82.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ACIYS--ALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAA |
ACIYS..ALILH.DEVTVTEDK.NAL.KAAGVNV.PFW...FAKALA.VNI.SLIC.VGAGG..PA...A | |
Retrocopy | ACIYSGPALILHNDEVTVTEDKTNALLKAAGVNVGPFWRNVFAKALAEVNIWSLICEVGAGGATPAGDPA |
Parental | PAGGPAPSTTAAPAEEKKVEAKKEES |
P..G.AP......A............ | |
Retrocopy | PPSGAAPAEKKVEAKKEESDESGDDT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 57 .04 RPM |
SRP017611_kidney | 0 .00 RPM | 269 .08 RPM |
SRP017611_liver | 0 .00 RPM | 111 .70 RPM |