RetrogeneDB ID: | retro_itri_155 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393325.1:5312352..5313042(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000028447 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000028196 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGDKIWLPFPVLLLATLTPELLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGL |
MGDKIWLPFPVLLLATLTPELLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGL | |
Retrocopy | MGDKIWLPFPVLLLATLTPELLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGL |
Parental | DIDFYLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWK |
DIDFYLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWK | |
Retrocopy | DIDFYLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWK |
Parental | KYITGTDMLEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQ |
KYITGTDMLEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQ | |
Retrocopy | KYITGTDMLEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000012192 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000012427 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000000073 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000028196 | 1 retrocopy |
retro_itri_155 ,
|