RetrogeneDB ID: | retro_meug_1653 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold511264:514..836(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSMEUG00000004661 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 83.64 % |
Parental protein coverage: | 58.47 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LSPPPLCLLCSAG-SS-SAAPHPLRMYACTKLISAPALVRSSSQLLSRPLSAVVLKRPEVRTDENLSILA |
...PPLCLLCSA..SS.S.APHPL.M..CTK.IS.PALVRSSSQLLSRPLSAVVLK.PE.RTDENLSILA | |
Retrocopy | VTAPPLCLLCSASSSS<SFAPHPLKMHTCTKFISTPALVRSSSQLLSRPLSAVVLK*PEIRTDENLSILA |
Parental | ASGPLTSLVPRCGFQTSAVSR-DVDTAAKFIGAGAATVGV |
ASGPLT.LVPRCGFQTSA.SR.D.DTAAKFIGAGAATVGV | |
Retrocopy | ASGPLTLLVPRCGFQTSAISR<DIDTAAKFIGAGAATVGV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |